Data Catalogue
A collection of global and international data sources available to The Trinity Challenge participants.
There's A Wealth Of Data Available
The Trinity Challenge’s data catalogue is collation of a broad range of global and local data sources which could serve as meaningful inputs or starting points for The Challenge.
These are intended as examples of available open-source datasets and not as an exhaustive list of all possible datasets, and hence a first attempt to bring together critical datasets for global public health from a data landscape that has historically been fragmented and unstructured.
Health
Environmental & Animal
Demographic
Mobility & Social
Socio-economic
Government & Policy
Health behaviour
Datasets on reported health behaviours and attitudes, including e.g. self-reported symptoms, confidences, norms
Johns Hopkins Center for Communication Programs’ KAP COVID dashboard
Kaiser Family Foundation COVID-19 vaccine monitor
University of Maryland COVID-19 World Survey Data API
MIT COVID-19 Beliefs, Behaviors & Norms Survey
University of Southern California: Understanding Coronavirus in America
COSMO - COVID-19 Snapshot Monitoring of population knowledge, risk perception, protection measures and trust
Institute of Global Health Innovation: COVID-19 behaviour tracker
Microbiology & viral ecology
Datasets provide overview of various genomic data, e.g. viral sequence data, human genetic variation, and other gene mapping data
The Broad Institute DNA/RNA sequencing
NCBI Virus's complete genomes
EBI data resources
ELIXIR cellular data catalogue
Symptoms
Data on tracked COVID-19 symptoms
Israel disease detection survey
COVID-19 healthy vs patient chest X-ray
MIT aggregated COVID-19 related clinical studies
COVID-19 search trends symptoms dataset
Facebook Global Symptom Survey map
Cases
Data on COVID-19 cases by various factors, e.g. geography (state and sub-state), ethnicity, age; as well as adjacent data such as test-positivity rates and R0 levels
John Hopkins University COVID-19 cases
CDC COVID-19 case surveillance
Open COVID-19 Data Working Group: Epidemiological data
US COVID-19 cases/deaths by ethnicity
France COVID-19 cases by age
US COVID-19 health outcomes
US COVID-19 live Rt values per state
Hospital capacity
Data on healthcare system capacity, e.g. projections of available hospital beds under different COVID-19 scenarios, or real-time data of available hospital staff
US hospital bed capacity
Germany hospital staff capacity
NPGEO Germany nursing home geographic distribution
Morbidity & mortality
Data on human morbidity and mortality from various diseases, and non-disease causes; as well as analysis of mortality fluctuations over time (e.g. COVID-19 excess mortality)
The Economist's tracker for COVID-19 excess deaths
The Human Mortality Database
Health statistics
Data on how long and how healthy different populations live; as well as on health system metrics and performance
OECD Health statistics
Global Health Data Exchange
Tencent Health COVID-19 live updates
COVID-19 research database in the US
Mental Health
Datasets and studies on emotional wellbeing of different populations
University College London: Understanding the psychological and social impact of the pandemic
COVID-Minds: >70 longitudinal studies related to mental health
Environmental
Environmental datasets with relevance for infectious diseases modelling, including projective climate data, biodiversity, air and water quality, and data on waste
Environmental data to study infectious diseases
OECD environmental data
NASA Earth Science Datasets
The Knowledge Network for Biocomplexity
Animal Reservoirs
Data on local biodiversity as relevant for predicting zoonotic risks, e.g. livestock density and potential for human-animal interaction in agricultural production systems
PREDICT project database
Agri-environmental indicator
EU animal production statistics
Demographic data that may serve to predict vulnerabilities to future health emergencies, including high-resolution population density, socio-demographic vulnerability, poverty and gender data
The World Bank COVID-19 data mapping to demographic indicators
WorldPop sub-state demographics
GRID3 settlements mapping in Africa
Africa COVID-19 Community Vulnerability Index
Facebook Population Density Maps
INSEE French demographic datasets
Mobility
Various perspectives on human mobility, including general, vehicular, use of public transport, and as influenced by COVID-19
Cuebiq community mobility insights and data
Google community mobility reports
Global Transnational Mobility Dataset
Facebook Movement Range Maps
Citymapper mobility index
Apple mobility trends reports
Mobility during COVID-19 based on mobile phones in Spain
RATP French transport provider
TfL UK transport provider
Baidu China Mobility data
Germany railroad mobility & cargo data
German mobility data portal
OpenTable sub-state restaurant use
Visitdata location data
Germany road tolls for commercial vehicles
Employment
Data on employment, unemployment and changes over time
The World Bank database on employment
Education
Data on education access, completion, and disruption, including due to COVID-19
UNESCO school closures due to COVID-19
National impact of COVID-19 on education and learning
Economic activity
Data on economic activity including growth, trade, labour, etc., by locality
EU total wages and salaries
The World Bank global distribution of economic activity
Eurostat COVID-19 datasets
Data on government policy responses to COVID-19 at the national and sub-national level, and its impact on health and other outcomes
Oxford Blavatnik School of Government Policy Response Tracker
German state-level public policy interventions
France public help during covid pandemic
Interactive modelling of reopening policy trade-offs in the US